Association of DNA Repair XRCC1 Gene Polymorphism with Leukemia

Authors

  • Wasfa Sana Institute of Molecular Biology and Biotechnology, University of Lahore, Sargodha Campus, Punjab, Pakistan.
  • Abid ur Rehman Department of Biotechnology and Genetic Engineering, Hazara University, Mansehra, KP. Pakistan.
  • Bisma Ahmed Department of Pathology, Ziauddin University Hospital Laboratory, Karachi, Sindh, Pakistan.
  • Md Abu Sayeed Department of Pharmacy, Mawlana Bhashani Science and Technology University, Tangail, Bangladesh.
  • Mashhood uz Zafar Farooq Department of Ophthalmology, Karachi Institute of Medical Sciences (KIMS), Malir Cantt, Karachi, Sindh, Pakistan.

DOI:

https://doi.org/10.70749/ijbr.v2i02.242

Keywords:

Leukemia, XRCC1, Leukemia, BER, Confidence Intervals, Single Nucleotide Variants, Genetic Polymorphism

Abstract

A group of cancerous diseases of the blood and bone marrow known as leukemias are life-threatening. It is crucial to recognize the leukemic cells lineage when making a diagnosis of leukemia because treatment for the disease depends on whether the cells are myeloid or lymphoid. As per the Observation There is total 300 blood samples in which 150 were leukemic patients and 150 were healthy person. The genotype distribution frequencies of the XRCC1 gene's SNP rs25487 results demonstrate a highly significant connection between heterozygous (GA) rs25487 of the XRCC1 gene and an increased risk of leukemia up to 2-folds (OR=2.52; 95% CI=1.51- 4.20; p=0.0004). The scenario is identical when it comes to homozygous mutant (AA), which also shown a highly significant connection with a reduced risk of leukemia and performs a protective role (OR=0.40; 95% CI=0.23-0.70; p=0.0014). The combined genotype model of mutant and hetero of rs25487 demonstrated a weakly non-significant correlation with leukemia (OR=1.14; 95% CI=0.72-1.82; p=0.5618). This study intended to look at the connection between leukemia risk regulation and XRCC1 polymorphisms, as well as the conceivable relationship between leukemia patients and the XRCC1 polymorphism (rs25487). It was determined that rs25487 was linked to a higher risk of leukemia in people

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References

Arora, R., Eden, T., & Kapoor, G. (2009). Epidemiology of childhood cancer in India. Indian Journal of Cancer, 46(4), 264. https://doi.org/10.4103/0019-509x.55546

Bakst, R., Powers, A., & Yahalom, J. (2020). Diagnostic and Therapeutic Considerations for Extramedullary Leukemia. Current Oncology Reports, 22(7). https://doi.org/10.1007/s11912-020-00919-6

Bennett, J. M., Catovsky, D., Daniel, M. T., Flandrin, G., Galton, D. A., Gralnick, H. R., & Sultan, C. (1989). Proposals for the classification of chronic (mature) B and T lymphoid leukaemias. French-American-British (FAB) Cooperative Group. Journal of Clinical Pathology, 42(6), 567–584. https://doi.org/10.1136/jcp.42.6.567

Bispo, J. A. B., Pinheiro, P. S., & Kobetz, E. K. (2020). Epidemiology and Etiology of Leukemia and Lymphoma. Cold Spring Harbor Perspectives in Medicine, 10(6). https://doi.org/10.1101/cshperspect.a034819

Bray, F., Laversanne, M., Weiderpass, E., & Soerjomataram, I. (2021). The ever‐increasing importance of cancer as a leading cause of premature death worldwide. Cancer, 127(16).

Campo, E., Harris, N. L., Jaffe, E. S., Pileri, S. A., Stein, H., Thiele, J., & Vardiman, J. W. (2008). WHO classification of tumours of haematopoietic and lymphoid tissues (Vol. 2, p. 439). S. H. Swerdlow (Ed.). Lyon, France: International agency for research on cancer.

Cerhan, J. R., & Slager, S. L. (2015). Familial predisposition and genetic risk factors for lymphoma. Blood, 126(20), 2265–2273. https://doi.org/10.1182/blood-2015-04-537498

Dinmohamed, A. G., Posthuma, E. F. M., Visser, O., Kater, A. P., Raymakers, R. A. P., & Doorduijn, J. K. (2018). Relative survival reaches a plateau in hairy cell leukemia: a population-based analysis in The Netherlands. Blood, 131(12), 1380–1383. https://doi.org/10.1182/blood-2017-12-820381

Dombret, H., & Gardin, C. (2015). An update of current treatments for adult acute myeloid leukemia. Blood, 127(1), 53–61. https://doi.org/10.1182/blood-2015-08-604520

Dong, Y., Shi, O., Zeng, Q., Lu, X., Wang, W., Li, Y., & Wang, Q. (2020). Leukemia incidence trends at the global, regional, and national level between 1990 and 2017. Experimental Hematology & Oncology, 9(1). https://doi.org/10.1186/s40164-020-00170-6

Dunlap, C. I. (1942). Effects of Radiation on the Blood and the Hemopoietic Tissues, including the Spleen, the Thymus and the Lymph Nodes.

Efficace, F., Rosti, G., Aaronson, N., Cottone, F., Angelucci, E., Molica, S., Vignetti, M., Mandelli, F., & Baccarani, M. (2013). Patient- versus physician-reporting of symptoms and health status in chronic myeloid leukemia. Haematologica, 99(4), 788–793. https://doi.org/10.3324/haematol.2013.093724

Faranoush, M., Mansoureh, H., Hoseini, R. H., Parvaneh, V., Falahazad, V., Mehrvar, A., Hedayati, A., Raheb, G., Aeine, A., Behzadi, M., Bakhsh, Y. H., Fazeli, Zangoei, R., Gh.R, B., & Ghahramanfard, F. (2011). Effects of L-asparginase administration on anticoagulant proteins and platelet function in patients with acute lymphoblastic leukemia. Koomesh Journal, 12(2), 175–180.

Ferlay, J., Soerjomataram, I., Dikshit, R., Eser, S., Mathers, C., Rebelo, M., Parkin, D. M., Forman, D., & Bray, F. (2015). Cancer incidence and mortality worldwide: Sources, methods and major patterns in GLOBOCAN 2012. International Journal of Cancer, 136(5), E359–E386. https://doi.org/10.1002/ijc.29210

Gilbert-Barness, E., Kapur, R. P., Oligny, L. L., Siebert, J. R., & Potter, E. L. (2007). Potter's pathology of the fetus, infant and child. (No Title).

Giri, S., Shrestha, R., Pathak, R., & Bhatt, V. R. (2015). Racial Differences in the Overall Survival of Hairy Cell Leukemia in the United States: A Population-Based Analysis of the Surveillance, Epidemiology, and End Results Database. Clinical Lymphoma Myeloma and Leukemia, 15(8), 484–488. https://doi.org/10.1016/j.clml.2015.03.001

Goldberg, S. L., Chen, E., Corral, M., Guo, A., Mody-Patel, N., Pecora, A. L., & Laouri, M. (2010). Incidence and Clinical Complications of Myelodysplastic Syndromes Among United States Medicare Beneficiaries. Journal of Clinical Oncology, 28(17), 2847–2852. https://doi.org/10.1200/jco.2009.25.2395

Hassanzade, J., Mohammadi, R., & Rajaeefard, A. R. (2013). Risk factors in childhood lymphoblastic leukemia in Shiraz-Iran (2009): an epidemilogical study. Journal of Gorgan University of Medical Sciences, 14(4), 119-124. http://goums.ac.ir/journal/article-1-1585-en.html

Healey, R., Patel, J. L., de Koning, L., & Naugler, C. (2015). Incidence of chronic lymphocytic leukemia and monoclonal B-cell lymphocytosis in Calgary, Alberta, Canada. Leukemia Research, 39(4), 429–434. https://doi.org/10.1016/j.leukres.2015.01.015

Henshaw, P. S., Hawkins, J. W., Meyer, H. L., Woodruff, J., & Marshall, J. F. (1944). Incidence of leukemia in physicians. Journal of the National Cancer Institute: JNCI., 4, 339.

Hjalgrim, L. L., Rostgaard, K., Schmiegelow, K., Söderhäll, S., Kolmannskog, S., Vettenranta, K., Kristinsson, J., Clausen, N., Melbye, M., Hjalgrim, H., & Gustafsson, G. (2003). Age- and Sex-Specific Incidence of Childhood Leukemia by Immunophenotype in the Nordic Countries. Journal of the National Cancer Institute, 95(20), 1539–1544. https://doi.org/10.1093/jnci/djg064

ICHIMARU, M., ISHIMARU, T., & BELSKY, J. L. (1978). Incidence of Leukemia in Atomic Bomb Survivors Belonging to a Fixed Cohort in Hiroshima and Nagasaki, 1950-71 Radiation dose, years after exposure, age at exposure, and type of leukemia. Journal of Radiation Research, 19(3), 262–282. https://doi.org/10.1269/jrr.19.262

Inaba, H., Greaves, M., & Mullighan, C. G. (2013). Acute lymphoblastic leukaemia. The Lancet, 381(9881), 1943-1955.

Kaneko, Y., T. Shikano, N. Maseki, Sakurai, M., Takeda, T., Y. Hiyoshi, J.-I. Mimaya, & Fujimoto, T. (1988). Clinical characteristics of infant acute leukemia with or without 11q23 translocations. PubMed, 2(10), 672–676.

Kantarjian, H. M., Keating, M. J., Walters, R. S., Smith, T. L., Cork, A., McCredie, K. B., & Freireich, E. J. (1986). Therapy-related leukemia and myelodysplastic syndrome: clinical, cytogenetic, and prognostic features. Journal of Clinical Oncology: Official Journal of the American Society of Clinical Oncology, 4(12), 1748–1757. https://doi.org/10.1200/JCO.1986.4.12.1748

Kantarjian, H. (2015). Acute myeloid leukemia-Major progress over four decades and glimpses into the future. American Journal of Hematology, 91(1), 131–145. https://doi.org/10.1002/ajh.24246

Kasinathan, G., Kori, A. N., & Azmie, N. M. (2019). Post-transplant lymphoproliferative disorder presenting as T-prolymphocytic leukemia: a case report. Journal of Medical Case Reports, 13(1). https://doi.org/10.1186/s13256-019-2164-y

Kiel, M. J., Velusamy, T., Rolland, D., Sahasrabuddhe, A. A., Chung, F., Bailey, N. G., Schrader, A., Li, B., Li, J., Ozel, A. B., Betz, B. L., Miranda, R. N., Medeiros, L. J., Zhao, L., Herling, M., Lim, M. S., & Elenitoba-Johnson, K. S. J. (2014). Integrated genomic sequencing reveals mutational landscape of T-cell prolymphocytic leukemia. Blood, 124(9), 1460–1472. https://doi.org/10.1182/blood-2014-03-559542

Lichtman, M. A. (2007). Cigarette smoking, cytogenetic abnormalities, and acute myelogenous leukemia. Leukemia, 21(6), 1137–1140. https://doi.org/10.1038/sj.leu.2404698

Lim, J. Y.-S., Bhatia, S., Robison, L. L., & Yang, J. J. (2013). Genomics of racial and ethnic disparities in childhood acute lymphoblastic leukemia. Cancer, 120(7), 955–962. https://doi.org/10.1002/cncr.28531

Lindahl, T. (1993). Instability and decay of the primary structure of DNA. Nature, 362(6422), 709–715. https://doi.org/10.1038/362709a0

Madanat, Y. F., Rybicki, L., Radivoyevitch, T., Jagadeesh, D., Dean, R., Pohlman, B., Kalaycio, M., Sekeres, M. A., Smith, M. R., & Hill, B. T. (2017). Long-Term Outcomes of Hairy Cell Leukemia Treated With Purine Analogs: A Comparison With the General Population. Clinical Lymphoma Myeloma & Leukemia, 17(12), 857–862. https://doi.org/10.1016/j.clml.2017.07.003

Malcovati, L., Hellström-Lindberg, E., Bowen, D., Adès, L., Cermak, J., del Cañizo, C., Della Porta, M. G., Fenaux, P., Gattermann, N., Germing, U., Jansen, J. H., Mittelman, M., Mufti, G., Platzbecker, U., Sanz, G. F., Selleslag, D., Skov-Holm, M., Stauder, R., Symeonidis, A., & van de Loosdrecht, A. A. (2013). Diagnosis and treatment of primary myelodysplastic syndromes in adults: recommendations from the European LeukemiaNet. Blood, 122(17), 2943–2964. https://doi.org/10.1182/blood-2013-03-492884

McCoy, J. P., & Overton, W. R. (1995). Immunophenotyping of congenital leukemia. Cytometry, 22(2), 85–88. https://doi.org/10.1002/cyto.990220202

Prashad, H. V. R., & Kumar, G. N. (2007). Congenital leukemia in a two month old boy. Internet J Pediat Neonatol, 6(2), 1-2.

McKenna, R. W., Parkin, J., Kersey, J. H., Gajl-Peczalska, K. J., Peterson, L. A., & Brunning, R. D. (1977). Chronic lymphoproliterative disorder with unusual clinical, morphologic, ultrastructural and membrane surface marker characteristics. The American Journal of Medicine, 62(4), 588–596. https://doi.org/10.1016/0002-9343(77)90422-3

Miranda-Filho, A., Piñeros, M., Ferlay, J., Soerjomataram, I., Monnereau, A., & Bray, F. (2018). Epidemiological patterns of leukaemia in 184 countries: a population-based study. The Lancet Haematology, 5(1), e14–e24. https://doi.org/10.1016/s2352-3026(17)30232-6

Mohammadi, M., Naderi, M., Ansari Moghaddam, A., Mahdavifar, N., & Mohammadian, M. (2018). Investigation of the Relationship between Breastfeeding and Leukemia in Children. Iranian journal of pediatric hematology and oncology, 8(2), 97-104.

Ou, Z., Yu, D., Liang, Y., He, W., Li, Y., Zhang, M., You, F., He, H., & Chen, Q. (2020). Analysis of the Global Burden of Disease study highlights the trends in death and disability‐adjusted life years of leukemia from 1990 to 2017. Cancer Communications. https://doi.org/10.1002/cac2.12094

Paltiel, O., Adler, B., Barchana, M., & Dann, E. J. (2006). A population‐based study of hairy cell leukemia in Israel. European Journal of Haematology, 77(5), 372–377. https://doi.org/10.1111/j.1600-0609.2006.00732.x

Peris-Bonet, R., Salmerón, D., Martínez-Beneito, M. A., Galceran, J., Marcos-Gragera, R., Felipe, S., ... & Spanish Childhood Cancer Epidemiology Working Group. (2010). Childhood cancer incidence and survival in Spain. Annals of Oncology, 21, iii103-iii110.

Pierce, D. A., Shimizu, Y., Preston, D. L., Vaeth, M., & Mabuchi, K. (1996). Studies of the Mortality of Atomic Bomb Survivors. Report 12, Part I. Cancer: 1950-1990. Radiation Research, 146(1), 1. https://doi.org/10.2307/3579391

Piñeros, M., Laversanne, M., Barrios, E., Cancela, M. de C., de Vries, E., Pardo, C., & Bray, F. (2022). An updated profile of the cancer burden, patterns and trends in Latin America and the Caribbean. The Lancet Regional Health - Americas, 13, 100294. https://doi.org/10.1016/j.lana.2022.100294

Preston, D. L., Pierce, D. A., Shimizu, Y., Cullings, H. M., Fujita, S., Funamoto, S., & Kodama, K. (2004). Effect of Recent Changes in Atomic Bomb Survivor Dosimetry on Cancer Mortality Risk Estimates. Radiation Research, 162(4), 377–389. https://doi.org/10.1667/RR3232

Pui, C.-H. (1995). Childhood Leukemias. New England Journal of Medicine, 332(24), 1618–1630. https://doi.org/10.1056/nejm199506153322407

Rau, A., Bhat, S., Rau, A., & Prakash, K. (2008). Congenital leukemia - A diagnostic dilemma. Indian Journal of Medical and Paediatric Oncology, 29(4), 41. https://doi.org/10.4103/0971-5851.51408

Rifat, R. H., Poran, Md. S., Islam, S., Sumaya, A. T., Alam, Md. M., & Rahman, M. R. (2023). Incidence, Mortality, and Epidemiology of Leukemia in South Asia: An Ecological Study. Open Journal of Epidemiology, 13(01), 73–82. https://doi.org/10.4236/ojepi.2023.131006

Sant, M., Allemani, C., Tereanu, C., De Angelis, R., Capocaccia, R., Visser, O., Marcos-Gragera, R., Maynadié, M., Simonetti, A., Lutz, J.-M., & Berrino, F. (2010). Incidence of hematologic malignancies in Europe by morphologic subtype: results of the HAEMACARE project. Blood, 116(19), 3724–3734. https://doi.org/10.1182/blood-2010-05-282632

Short, N. J., Rytting, M. E., & Cortes, J. E. (2018). Acute myeloid leukaemia. The Lancet, 392(10147), 593-606.

Singhal, M., Raina, V., Gupta, R., & Das, P. (2010). T cell-prolymphocytic leukemia detected in a patient of breast cancer at the time of recurrence: a case report. Cases Journal, 3(1). https://doi.org/10.1186/1757-1626-3-4

Akshay, A. A. (2015). Advances in the Treatment of Hairy Cell Leukemia. Journal of Hematology & Thromboembolic Diseases, 03(03). https://doi.org/10.4172/2329-8790.1000210

Wiber, M., Maitre, E., Poncet, J.-M., Duchenet, V., Damaj, G., Cornet, E., & Troussard, X. (2020). A population-based study of hairy cell leukemia over a period of 20 years. Cancer Treatment and Research Communications, 25, 100236. https://doi.org/10.1016/j.ctarc.2020.100236

Zolala, F., Ayatollahi, Sar., Ayatollahi, S., & Shahriary, M. (2004). Determination the Inducing Factors of Acute Lymphoblastic Leukemia in Children Under 15 Years Old in Fars Province in the Year 2001. Journal of Rafsanjan University of Medical Sciences, 3(4), 267–275.

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Published

2024-12-02

How to Cite

Association of DNA Repair XRCC1 Gene Polymorphism with Leukemia. (2024). Indus Journal of Bioscience Research, 2(02), 719-731. https://doi.org/10.70749/ijbr.v2i02.242